PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr3P10600_001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bHLH
Protein Properties Length: 461aa    MW: 49571.1 Da    PI: 6.3749
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr3P10600_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH361.2e-11289337355
                            HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                             +h+ +Er RR++iN+++  L++l+P +    sk   Ka++L + ++Y++sLq
  GSMUA_Achr3P10600_001 289 NSHSLAERVRREKINERMKLLQDLVPGC----SKVTGKAMMLDEIINYVQSLQ 337
                            58*************************9....556*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.09E-12284341No hitNo description
SuperFamilySSF474597.85E-18284353IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088816.139286336IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.9E-18287352IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.3E-9289337IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.6E-12292342IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 461 aa     Download sequence    Send to blast
MDMHGKDGCN SLKNEDNLDY NYSGNSSDWQ QCNPSIGCLD SGNPSAAVSQ GNQIGSTPCS  60
SISMADPFSA GLWNLSTEST SLDLCKDKLQ GSSNQITGNS MSVGGTLLQT GSGVLHQSLS  120
HFPSDSAFIE RAARFSCFGG SDLGGLMNPY SAAQSQSPHS NASRESSGAQ IQKNEINMME  180
AVRGGSLSTT DHGSKEKDNS HAAGNSSSTL PAAMKRKRPS EDMALDQAKV ASQISGEMDD  240
DNMELEKKAE HNSSTAATSK PGGKQVKDSN ESSKEDFIHI RARRGQATNS HSLAERVRRE  300
KINERMKLLQ DLVPGCSKVT GKAMMLDEII NYVQSLQQQV EFLSMKLAAI NPRLDIDIEA  360
VLSKYLLQTC NGPSAAMGSS SGIVRPPPLH PSQQGLAQAG LSGNVNLPDL FRRSINAQMT  420
APQGYKEPKM QVPNAWDEEL HNVMQMAYNG TVNLNTHRVQ Q
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009391756.10.0PREDICTED: transcription factor bHLH49-like
RefseqXP_009391757.10.0PREDICTED: transcription factor bHLH49-like
TrEMBLM0SDH70.0M0SDH7_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr3P10600_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP29093785
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.33e-70bHLH family protein